Search results for "computational chemistry"

showing 10 items of 1209 documents

NMR Spectroscopic and quantum chemical characterization of the (E)- and (Z)- isomers of the penta-1,3-dienyl-2-cation

2003

Dilute solutions of the (E )− and (Z )− isomers of pent-1,3-dienyl-2-cations (1) were obtained from reaction of 4-chloro-1,2-pentadiene (2) with SbF5 in SO2ClF/SO2F2 at −135 °C using high-vacuum co-condensation techniques. The experimental NMR spectra of the mixture of the two isomers were compared with quantum chemical 13C NMR chemical shift calculations at HF-SCF, MP2, CCSD and CCSD(T) levels using MP2/tzp geometries. Quantum chemical shift calculations were performed with a tzp basis (9s5p1d/5s3p1d) for carbon and a dz basis (4s/2s) for hydrogen using gauge-including atomic orbitals (GIAOs). The HF-SCF calculations deviate significantly for the positively charged carbon atoms of the ally…

NMR spectra databaseElectronic correlationCarbon-13 NMR satelliteComputational chemistryChemistryChemical shiftOrganic ChemistryAb initioPhysical chemistryNuclear magnetic resonance spectroscopyPhysical and Theoretical ChemistryCarbon-13 NMRResonance (chemistry)Journal of Physical Organic Chemistry
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Theoretical study of the molecular structure and the stability of neutral and reduced tetracyanoethylene

2003

Abstract The molecular structure and the stability of neutral, anionic, and dianionic tetracyanoethylene (TCNE) have been studied with MP2, coupled-cluster (CC), and density functional theory (DFT) procedures. The optimized geometries are in agreement with the available experimental data, although significant deviations for the CN bond distance have been obtained at the MP2 level. The adiabatic electron affinity of TCNE calculated with the B3LYP method is overestimated by 0.32 eV. In the light of the CC results, the source of such an overestimation is suggested to lie on the theoretical approach, rather than on a too low experimental value.

Electron densityGeneral Physics and AstronomyTetracyanoethyleneMolecular physicsBond lengthchemistry.chemical_compoundMolecular geometrychemistryComputational chemistryAb initio quantum chemistry methodsElectron affinityPhysics::Atomic and Molecular ClustersMoleculeDensity functional theoryPhysics::Chemical PhysicsPhysical and Theoretical ChemistryChemical Physics Letters
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Host–Guest Interactions of Sodiumsulfonatomethyleneresorcinarene and Quaternary Ammonium Halides: An Experimental–Computational Analysis of the Guest…

2020

The molecular recognition of nine quaternary alkyl- and aryl-ammonium halides (Bn) by two different receptors, Calkyl-tetrasodiumsulfonatomethyleneresorcinarene (An), were studied in solution using...

chemistry.chemical_classification010405 organic chemistryHalideGeneral Chemistry010402 general chemistryCondensed Matter Physics01 natural sciences0104 chemical scienceschemistry.chemical_compoundMolecular recognitionchemistryComputational chemistryGeneral Materials ScienceAmmoniumComputational analysisInclusion (mineral)AlkylCrystal Growth & Design
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Unexpected Scholl Reaction of 6,7,13,14-Tetraarylbenzo[k]tetraphene: Selective Formation of Five-Membered Rings in Polycyclic Aromatic Hydrocarbons

2016

Cyclodehydrogenation is a versatile reaction that has enabled the syntheses of numerous polycyclic aromatic hydrocarbons (PAHs). We now describe a unique Scholl reaction of 6,7,13,14-tetraarylbenzo[k]tetraphene, which "unexpectedly" forms five-membered rings accompanying highly selective 1,2-shift of aryl groups. The geometric and optoelectronic nature of the resulting bistetracene analogue with five-membered rings is comprehensively investigated by single-crystal X-ray, NMR, UV-vis absorption, and cyclic voltammetry analyses. Furthermore, a possible mechanism is proposed to account for the selective five-membered-ring formation with the rearrangement of the aryl groups, which can be ration…

010405 organic chemistryStereochemistryArylGeneral Chemistry010402 general chemistryHighly selective01 natural sciencesBiochemistryCatalysis0104 chemical sciencesScholl reactionchemistry.chemical_compoundColloid and Surface ChemistrychemistryComputational chemistryDensity functional theoryAbsorption (chemistry)Cyclic voltammetryTetrapheneJournal of the American Chemical Society
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Synthesis and molecular and electronic structures of a series of Mo3CoSe4 cluster complexes with three different metal electron populations.

2008

The synthesis, crystal structure, and magnetic properties of [Mo 3(CoCO)Se 4(dmpe) 3Cl 3] ( 1), [Mo 3(CoCl)Se 4(dmpe) 3Cl 3] ( 2), and [Mo 3(CoCl)Se 4(dmpe) 3Cl 3](TCNQ) ([ 2](TCNQ)) (dmpe = 1,2-bis(dimethylphosphanyl)ethane; TCNQ = 7,7,8,8-tetracyanoquinomethane) cubane-type complexes with 16, 15, and 14 metal electrons, respectively, are reported. These compounds complete the series of cobalt-containing Mo 3CoQ 4 (Q = S, Se) cubane-type complexes, which allows a complete analysis of the consequences of replacing the inner chalcogen and the metal electron count on the structural, magnetic, and electrochemical properties. The experimental evidence is theoretically supported and rationalized…

ChemistryHeteroatomElectronCrystal structureElectrochemistrylaw.inventionInorganic ChemistryMetalChalcogenCrystallographylawComputational chemistryvisual_artvisual_art.visual_art_mediumPhysical and Theoretical ChemistryElectron paramagnetic resonanceHOMO/LUMOInorganic chemistry
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A Molecular Electron Density Theory Study of the Reactivity of Azomethine Imine in [3+2] Cycloaddition Reactions

2017

The electronic structure and the participation of the simplest azomethine imine (AI) in [3+2] cycloaddition (32CA) reactions have been analysed within the Molecular Electron Density Theory (MEDT) using DFT calculations at the MPWB1K/6-311G(d) level. Electron localisation function (ELF) topological analysis reveals that AI has a pseudoradical structure, while the conceptual DFT reactivity indices characterise this TAC as a moderate electrophile and a good nucleophile. The non-polar 32CA reaction of AI with ethylene takes place through a one-step mechanism with low activation energy, 5.3 kcal/mol-1. A bonding evolution theory (BET) study indicates that this reaction takes place through a non-…

Models MolecularThiosemicarbazones[3+2] cycloaddition reactionsImineMolecular Conformationmolecular mechanismsazomethine iminePharmaceutical ScienceElectronsElectronic structureActivation energy010402 general chemistry01 natural sciencesArticlebonding evolution theoryAnalytical Chemistrychemistry.chemical_compoundNucleophileComputational chemistryDrug Discoveryconceptual density functional theoryMoleculeReactivity (chemistry)organic_chemistryelectron densityPhysical and Theoretical Chemistryazomethine imine; [3+2] cycloaddition reactions; molecular electron density theory; conceptual density functional theory; electron localisation function; bonding evolution theory; electron density; molecular mechanisms; chemical reactivityCycloaddition ReactionMolecular Structure010405 organic chemistrymolecular electron density theoryOrganic ChemistryCycloaddition0104 chemical scienceschemistryChemistry (miscellaneous)ElectrophileQuantum TheoryThermodynamicsMolecular MedicineDensity functional theoryImineselectron localisation functionAzo Compoundschemical reactivityMolecules; Volume 22; Issue 5; Pages: 750
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Towards an accurate molecular orbital theory for excited states : Ethene, butadiene, and hexatriene

1993

A newly proposed quantum chemical approach for ab initio calculations of electronic spectra of molecular systems is applied to the molecules ethene, trans‐1,3‐butadiene, and trans‐trans‐1,3,5‐hexatriene. The method has the aim of being accurate to better than 0.5 eV for excitation energies and is expected to provide structural and physical data for the excited states with good reliability. The approach is based on the complete active space (CAS) SCF method, which gives a proper description of the major features in the electronic structure of the excited state, independent of its complexity, accounts for all near degeneracy effects, and includes full orbital relaxation. Remaining dynamic ele…

ErrorsGeneral Physics and AstronomyPolyenesElectronic structuresymbols.namesakeRydberg StatesAb initio quantum chemistry methodsComputational chemistrySinglet statePhysical and Theoretical ChemistryTriplet state:FÍSICA::Química física [UNESCO]AccuracyExcitationCalculation MethodsButadieneTripletsChemistryMolecular orbital theoryScf CalculationsExcited StatesCalculation Methods ; Quantum Chemistry ; Ab Initio Calculations ; Electron Spectra ; Butadiene ; Accuracy ; Scf Calculations ; Triplets ; Rydberg States ; Excitation ; Errors ; Polyenes ; Excited StatesQuantum ChemistryUNESCO::FÍSICA::Química físicaElectron SpectraExcited stateRydberg formulasymbolsRydberg stateAtomic physicsAb Initio Calculations
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Seeking the Source of Catalytic Efficiency of Lindane Dehydrochlorinase, LinA.

2020

Herein we present the results of an in-depth simulation study of LinA and its two variants. In our analysis, we combined the exploration of protein conformational dynamics with and without bound substrates (hexachlorocyclohexane (HCH) isomers) performed using molecular dynamics simulation followed by the extraction of the most frequently visited conformations and their characteristics with a detailed description of the interactions taking place in the active site between the respective HCH molecule and the first shell residues by using symmetry-adapted perturbation theory (SAPT) calculations. A detailed investigation of the conformational space of LinA substates has been accompanied by desc…

biologyChemistryActive siteLyasesInteraction energyLigand (biochemistry)Molecular mechanicsArticleSurfaces Coatings and FilmsMolecular dynamicsBacterial ProteinsComputational chemistryCatalytic DomainMaterials Chemistrybiology.proteinMoleculePhysical and Theoretical ChemistryPerturbation theoryPotential of mean forceHexachlorocyclohexaneThe journal of physical chemistry. B
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General Kinetic Analysis and Comparison of Molecular Weight Distributions for Various Mechanisms of Activity Exchange in Living Polymerizations

1997

The molecular weight distributions in many living (e.g. anionic, group transfer, cationic, and radical) polymerizations strongly depend on the dynamics of various equilibria between chain ends of d...

Inorganic ChemistryPolymers and PlasticsKinetic modelPolymerizationComputational chemistryChemistryOrganic ChemistryKinetic analysisMaterials ChemistryCationic polymerizationMolar mass distributionOrganic chemistryMacromolecules
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A CNDO/2 study on the additivity and the nature of the non-additivity of the substituent effects on13C NMR shifts in chlorobenzenes and chlorophenols

1980

The general correlation between the electron densities and the 13C NMR chemical shifts is found to be quite poor in the cases discussed. The non-additivities of the substituent effects on the chemical shifts and the CNDO/2 electron densities correlate only weakly. However, when the electron densities are made specific to different types of atomic orbitals, the s electrons have a pronounced effect in all the models tested. This is explained by an indirect effect on the 〈1/r3〉 term of the p electrons. Good correlations are found between the sums of the chemical shifts and the corresponding sums of the substituent charge excesses. The different behaviour of OH and Cl substituents in the additi…

CNDO/2chemistry.chemical_compoundAtomic orbitalComputational chemistryChemistryChlorobenzeneChemical shiftAdditive functionSubstituentGeneral Materials ScienceGeneral ChemistryElectronCarbon-13 NMROrganic Magnetic Resonance
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